Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833728.1_cds_XP_016505383.1_18728
CDS Infomation

[gene=LOC107823266] [db_xref=GeneID:107823266] [protein=carbamoyl-phosphate synthase large chain, chloroplastic-like] [protein_id=XP_016505383.1] [location=join(8629..9975,10644..11336,11835..13391)] [gbkey=CDS]
Sequence

ATGAAGATGGGTTATTGTGAAAATGCTGCATATAGGCTCATCTCTTCATCTTCTTCCTCT
GTTCTTCCTCCTTCCAAAATATATTCATCAAGAACCCACCTTTTCCCACTATTTCCCCAC
TCTGCCAAATCCTCAGTTTACAAAAGCTCCTCTTTTCTGCACCTCCAGTCTCGGCCATCC
GTTTTGGGTCACACCCATTTGCGCAAAAGGGTGAATTTTTCGATTGTCAATGAGCAAAGC
CCCAATAATGATTCTGTTGTTCAAAAGCAGAAATTGGGTAAAAGAACAGATATAAAGAAG
ATTTTGATACTGGGCGCAGGGCCAATAGTGATAGGACAAGCTTGTGAGTTTGATTATTCA
GGTACTCAAGCTTGTAAAGCTCTTAGGGAAGAAGGGTATGAGGTTATACTGATTAATTCG
AACCCTGCAACGATTATGACCGACCCCGACATGGCGGACAGGACTTATATTGAGCCAATG
ACACCAGAACTTGTAGAGCAAGTCTTAGAGAAAGAGAGGCCTGATGCATTGTTGCCTACA
ATGGGTGGCCAAACTGCTCTTAATTTGGCTGTAGCGTTGGCGGAGAGTGGGGTGCTTGAT
AAGTATGGAGTCGAGTTGATTGGGGCGAAGCTTGGTGCCATAAAGAAAGCGGAGGATAGG
GATTTGTTTAAGCAGGCAATGAAGAATATTGGGATAAAGACTCCACCTTCAGGCATTGGC
AATACTTTGGAGGAATGTATCGAGATAGCCGGTGAAATCGGGGAGTTTCCATTGATTATA
AGGCCAGCTTTCACATTAGGTGGCACTGGTGGTGGAATTGCTTATAACAGGGAGGAATTC
GAGGCGATATGTAAGTCGGGGTTAGCAGCTAGTTTGACATCACAAGTTTTGGTTGAGAAG
TCTTTGTTAGGTTGGAAAGAATACGAGCTTGAGGTTATGAGAGATTTGGCCGACAATGTG
GTTATCATTTGTTCAATTGAGAATATTGATCCTATGGGAGTTCATACGGGAGACTCCATC
ACTGTGGCTCCTGCTCAGACTTTGACAGATAAAGAGTACCAACGACTTAGGGATTATTCG
ATTGCCATCATCAGGGAAATCGGGGTTGAGTGTGGTGGTTCTAATGTACAGTTTGCTGTA
AATCCAGTTGATGGGGAAGTCATGGTAATTGAAATGAATCCTAGAGTTTCGAGGTCTTCA
GCTTTAGCCTCAAAAGCTACTGGCTTTCCAATAGCTAAGATGGCTGCTAAGCTATCAGTT
GGATACTCCCTGGATCAGATTCCTAACGATATCACAAAGAAGACTCCAGCTAGTTTTGAG
CCATCCATAGATTATGTTGTTACAAAGATACCCAGATTTGCATTTGAGAAATTCCCTGGA
TCTGAGGCCATACTGACAACTCAGATGAAGTCTGTTGGTGAGTCCATGGCAGTAGGTCGC
ACATTCCAAGAATCCTTCCAAAAAGCAGTGCGGTCTCTAGAATCTGGTTATTCTGGATGG
GGCTGTACCCAGGTTAAGGAATTGGACTGGGATTGGGACAAATTGAAGTATAGTCTTCGG
GTTCCTAATCCTGATCGCATCCATGCGGTATATGCTGCAATGAAGAGGGGGATGAAGGTA
GATGACATCTTTGAGCTCAGTTACATAGACAAATGGTTCCTCACTCAGCTAAGGGAGCTT
GTAAATGTGGAGCAATTCCTTCTGGCTCGCAGTTTGTCGGACTTAAGAAAGGATGACTTC
TATGAAGTGAAAAAGAGAGGGTTTAGTGACAGACAGATAGCTTTTGCGACAAAGTCCAGT
GAGGAGGAGGTTCGGTCAAGACGTTTGTCTTTGGGTGTGAAACCAGCATATAAACGAGTT
GATACGTGTGCTGCAGAATTTGAGGCTGATACGCCTTATATGTATTCATCTTATGACCAT
GAGTGTGAATCAGCTCCTACCGGTAGGAAGAAAGTGTTGATTTTAGGTGGTGGACCAAAC
CGAATTGGACAGGGTATTGAGTTTGATTATTGTTGCTGTCATACATCCTTTGCCCTTCAG
GACGCAGGCTATGAAACAATTATGATGAATTCCAATCCTGAGACAGTTTCTACAGATTAC
GACACAAGTGATCGTCTCTACTTCGAGCCTCTGACAGTCGAGGATGTTCTTAATATCATC
GACTTGGAAGGACCTGATGGTATCATTGTGCAATTTGGAGGTCAAACCCCATTGAAACTC
GCTCTTCCAATTCAGAATTACTTGGATGAGCGAAGGCCTAAGACCAGAAGTGGAGCTGGC
TTTGTTCGCATTTGGGGTACATCACCTGATTCCATTGATGCAGCTGAAGATAGGGAGAGG
TTCAACGCCATCCTGAATGAACTACAGATTGTGCAGCCAAAAGGGGGTATCGCAAAAAGC
GAAAAGGATGCCGTTGCCATCGCGACAGAAGTGGGATATCCTGTTGTCGTCCGGCCCTCT
TATGTCTTAGGTGGCCGGGCAATGGAGATAGTTTACAACAATGACAAATTAGTGACATAC
CTTGAAAATGCTGTTAAGGTAGATCCGGAGCGCCCTGTCCTGATTGACAAGTATTTAACT
GATGCTGTAGAGATTGATATTGATGCACTTGCTGATTTGCATGGTAATGTGGTCATCGGT
GGAATAATGGAGCACATTGAGCAGGCTGGGGTTCATTCAGGTGACTCAGCTTGCATGCTT
CCTACACAAACAATTTCTGATTCATGCTTGGAAACTATTAGGTCGTGGACTACGAAATTA
GCAAAGAGGCTAAATGTGTGTGGCCTCATGAATTGTCAATATGCCATCAGTGCTTCTGGT
GAGGTGTTCTTGCTTGAGGCTAACCCCCGTGCATCACGGACGGTTCCTTTTGTTTCCAAG
GCGATTGGGCACCCGTTGGCTAAATACGCTTCTCTAGTTATGTCAGGTAAATCACTACAT
GACCTAAACTTCACCAAGGAGGTTATCCCAAGACATGTATCAGTTAAAGAAGCTGTTCTT
CCATTTGAGAAATTCCAAGGATGCGATGTGCTTCTTGGTCCTGAGATGCGCAGCACTGGT
GAGGTAATGGGTATTCACTATGAGTCATCAATTGCATTTGCCAAGGCACAAATTGCTGCC
GGACAGAAAATGCCACTTTCGGGCACTCTATTCCTAAGTTTAAATGAATTGACAAAACCT
CAACTTACCACAATTGCTCGAGCCTTTTTGGGGATTGGATTTCAAATCATTGCAACTTCT
GGAACTGCACGTGTACTTGAATTAGAAGGCATGCCAGTGGAACGAGTGCTTAAAATGCAT
GAAGGGCGGCCACATCCTGCAGATCTCATTGCCAATGGGCAGATTCAGTTGATGGTGATC
ACAAGTTCAGGGGACGCACTTGATCAGATTGATGGCCGGAAGCTGAGAAGGATGGCTCTC
GCGTACAAGATACCTGTAATAACAACAATTGCAGGGGCTTTGGCCACCGCTGATGCAATA
AAAAGCTTGAAATGCAACAAGATTAAGATGACAGCTCTTCAGGATTACTTTGATGTCAAG
AAGGTAGAAGCTGAGCTAAAAAACTTGCAGTGTGCGTCATCTGTTTCTACTAGTTGA

Peptide Sequence

PEP ID

XP_016505383.1
PEP Infomation

PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic-like [Nicotiana tabacum]
Sequence

MKMGYCENAAYRLISSSSSSVLPPSKIYSSRTHLFPLFPHSAKSSVYKSSSFLHLQSRPS
VLGHTHLRKRVNFSIVNEQSPNNDSVVQKQKLGKRTDIKKILILGAGPIVIGQACEFDYS
GTQACKALREEGYEVILINSNPATIMTDPDMADRTYIEPMTPELVEQVLEKERPDALLPT
MGGQTALNLAVALAESGVLDKYGVELIGAKLGAIKKAEDRDLFKQAMKNIGIKTPPSGIG
NTLEECIEIAGEIGEFPLIIRPAFTLGGTGGGIAYNREEFEAICKSGLAASLTSQVLVEK
SLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYS
IAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSV
GYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEAILTTQMKSVGESMAVGR
TFQESFQKAVRSLESGYSGWGCTQVKELDWDWDKLKYSLRVPNPDRIHAVYAAMKRGMKV
DDIFELSYIDKWFLTQLRELVNVEQFLLARSLSDLRKDDFYEVKKRGFSDRQIAFATKSS
EEEVRSRRLSLGVKPAYKRVDTCAAEFEADTPYMYSSYDHECESAPTGRKKVLILGGGPN
RIGQGIEFDYCCCHTSFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNII
DLEGPDGIIVQFGGQTPLKLALPIQNYLDERRPKTRSGAGFVRIWGTSPDSIDAAEDRER
FNAILNELQIVQPKGGIAKSEKDAVAIATEVGYPVVVRPSYVLGGRAMEIVYNNDKLVTY
LENAVKVDPERPVLIDKYLTDAVEIDIDALADLHGNVVIGGIMEHIEQAGVHSGDSACML
PTQTISDSCLETIRSWTTKLAKRLNVCGLMNCQYAISASGEVFLLEANPRASRTVPFVSK
AIGHPLAKYASLVMSGKSLHDLNFTKEVIPRHVSVKEAVLPFEKFQGCDVLLGPEMRSTG
EVMGIHYESSIAFAKAQIAAGQKMPLSGTLFLSLNELTKPQLTTIARAFLGIGFQIIATS
GTARVLELEGMPVERVLKMHEGRPHPADLIANGQIQLMVITSSGDALDQIDGRKLRRMAL
AYKIPVITTIAGALATADAIKSLKCNKIKMTALQDYFDVKKVEAELKNLQCASSVSTS

Transcript Sequence

Gene sequence data has not been registered.